Publications by Computational Biology and Bioinformatics

Spoendlin, F. et al. (2023) “Improved computational epitope profiling using structural models identifies a broader diversity of antibodies that bind to the same epitope”, Frontiers in Molecular Biosciences, 10, p. 1237621.

Crook, O. et al. (2023) “A Functional Bayesian Model for Hydrogen–Deuterium Exchange Mass Spectrometry”, Journal of Proteome Research, 22(9), pp. 2959–2972.

Carrera, J.-P. et al. (2023) “Madariaga and Venezuelan equine encephalitis virus seroprevalence in rodent enzootic hosts in Eastern and Western Panama.”, bioRxiv [Preprint].

Murphy, C. et al. (2023) “Effectiveness of social distancing measures and lockdowns for reducing transmission of COVID-19 in non-healthcare, community-based settings”, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 381(2257).

Whitaker, M. et al. (2023) “SARS-CoV-2 rapid antibody test results and subsequent risk of hospitalisation and death in 361,801 people”, Nature Communications, 14(1), p. 4957.

Pritchard, M. et al. (2023) “Natural immune boosting leads to synchrony in immunity and cyclic outbreaks of disease for pathogens with rapidly waning immunity”, in.

Moloney, N. et al. (2023) “Mapping diversity in African trypanosomes using high resolution spatial proteomics”, Nature Communications, 14(1), p. 4401.

Armbruster, S. and Reinert, G. (2023) “COVID-19 incidence in the Republic of Ireland: A case study for network-based time series models.”

Limnios, S. et al. (2023) “SaGess: Sampling Graph Denoising Diffusion Model for Scalable Graph Generation”, arXiv.

Penn, M. and Donnelly, C. (2023) “Optimality of maximal-effort vaccination”, Bulletin of Mathematical Biology, 85.